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Joyce Fang

Princeton University

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Bioinformatics· 1

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Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1 Assay:long-read sequencing· 1 Research Focus:variant effect prediction· 1

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Aviya LitmaniD· 1 shared Chandra L. TheesfeldiD· 1 shared Christopher Y. Park· 1 shared Ksenia SokolovaiD· 1 shared Natalie SauerwaldiD· 1 shared Olga G. TroyanskayaiD· 1 shared Tess A. Marvin· 1 shared Zhicheng Pan· 1 shared

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Aviya LitmanORCID

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1 paper

Recent·Most cited

BioinformaticsCell GenomicsPeer-reviewedJan 16, 2026

Variant-resolved prediction of context-specific isoform variation with a graph-based attention model

Aviya Litman, Zhicheng Pan, Ksenia Sokolova…·Olga G. Troyanskaya

Otari predicts tissue-specific isoform abundance changes caused by genetic variants using a graph-based attention model trained on genomic and long-read transcriptome data.

2 citations

humanlong-read sequencing

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