Author

K. Bresser

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:proteomics· 3 Research Focus:gene regulatory network inference· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. Bradaric· 1 shared A. Guislain· 1 shared A. J. R. Heck· 1 shared A. Jeko· 1 shared A. Jurgens· 1 shared B. Evers· 1 shared B. Morris· 1 shared B. Nicolet· 1 shared

Activity by Year

2023-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperImmunology

A. Bradaric

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Gene and protein sequence features augment HLA class I ligand predictions

K. Bresser, B. Nicolet, A. Jeko, W. Wu, F. Loayza-Puch, R. Agami, A. J. R. Heck, M. J. R. Wolkers, T. Schumacher

The paper evaluates gene and protein sequence features as predictors of HLA class I ligand presentation, showing they improve predictions comparable to experimental gene expression data.

bioRxiv · Sep 3, 2023Immunology

Learning the sequence code of protein expression in human immune cells

B. P. Nicolet, A. Jurgens, K. Bresser, A. Guislain, A. Bradaric, M. Wolkers

SONAR, a machine learning pipeline, learns the sequence code for protein abundance in human immune cells, revealing cell type-specific and activation-dependent sequence features that can enhance T cell receptor expression.

bioRxiv · Sep 1, 2023Immunology

A fluorescence-based sensor screen identifies MED12 as a potential microsatellite instability regulator in colon cancer

J. M. Fernandes Neto, S. Venkatesan, M. Dias, C. Lieftink, B. Morris, K. Bresser, L. Vecchione, B. Evers, F. Scheeren, T. Shumacher, R. Beijersbergen, R. Bernards

bioRxiv · Aug 17, 2023 · PreprintCancer Biology