Author

Klim Kolyvanov

Max Delbrück Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:spatial transcriptomics· 2 Organism:C. elegans· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Ella BahryiD· 2 shared Laura BreimanniD· 2 shared Marwan ZouinkhiiD· 2 shared Stephan PreibischiD· 2 shared Benjamin R. KingiD· 1 shared Kyle HarringtoniD· 1 shared Lena Annika StreetiD· 1 shared Leo Epstein· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersDevelopmental Biology

Ella BahryORCID

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2 papers

Recent·Most cited

Developmental BiologybioRxivPreprintMay 15, 2024

Analysis of developmental gene expression using smFISH and in silico staging of C. elegans embryos

Laura Breimann, Ella Bahry, Marwan Zouinkhi…·Sevinç Ercan

The paper develops a smFISH method with computational staging to study transcription dynamics in C. elegans embryos and finds that the DCC reduces dpy-23 transcription frequency.

DOI 10.1101/2024.05.15.594414

C. elegansspatial transcriptomics

𝕏 PostBluesky

BioinformaticsNature MethodsPeer-reviewedNov 17, 2022

RS-FISH: Precise, interactive, fast, and scalable FISH spot detection

Ella Bahry, Laura Breimann, Marwan Zouinkhi…·Stephan Preibisch

RS-FISH detects FISH spots accurately and efficiently in 2D and 3D images, supporting applications like smFISH and spatial genomics.

95 citationstop 1%

spatial transcriptomicsexperimental assay

𝕏 PostBluesky