Author

L. Milne

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Assay:long-read sequencing· 2 Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:transcription & RNA processing· 2 Organism:Arabidopsis· 1 Approach:deep learning· 1

Frequent Co-Authors

J. C. Entizne· 2 shared J. W. Brown· 2 shared M. Coulter· 2 shared R. Waugh· 2 shared R. Zhang· 2 shared W. Guo· 2 shared A. b. Hur· 1 shared A. Barta· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersPlant Biology

J. C. Entizne

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3 papers

Recent·Most cited

Silencing of a raspberry homologue of VRN1 is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes.

B. Mateos, K. Preedy, L. Milne, J. Morris, P. E. Hedley, C. G. Simpson, R. D. Hancock, J. Graham

This study identifies a VRN1 homologue in raspberry that, when silenced by upstream insertions in Glen Dee, causes dormancy misregulation and altered gene expression.

bioRxiv · Feb 13, 2024 · PreprintPlant Biology

BaRTv2: A highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification

M. Coulter, J. C. Entizne, W. Guo, M. Bayer, R. Wonneberger, L. Milne, M. Schreiber, A. Haaning, G. Muehlbauer, N. McCallum, J. Fuller, C. Simpson, N. Stein, J. W. Brown, R. Waugh, R. Zhang

The paper develops BaRTv2.18, a highly resolved barley reference transcriptome, improving transcript diversity and quantification accuracy over previous versions.

bioRxiv · Sep 10, 2021Plant Biology

A high resolution single molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

R. Zhang, R. Kuo, M. Coulter, C. P. G. Calixto, J. C. Entizne, W. Guo, Y. Marquez, L. Milne, S. Riegler, A. Matsui, M. Tanaka, S. Harvey, G. Yubang, T. Wiebner-Kroh, M. Crespi, , J. W. Brown

This paper introduces a new Arabidopsis transcriptome dataset with improved accuracy and resolution using novel Iso-seq analysis methods, enhancing transcript expression and splicing analysis.

bioRxiv · Sep 2, 2021 · PreprintPlant Biology