Author

M. Khammash

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:E. coli· 1 Research Focus:phylogenetics / evolution· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Baumschlager· 1 shared A. Gupta· 1 shared B. Di Ventura· 1 shared D. Benzinger· 1 shared E. B. Akmeric· 1 shared E. Romano· 1 shared G. Schmidt· 1 shared H. Hu· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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1 shared paperMicrobiology

A. Baumschlager

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Optogenetic closed-loop feedback control of the unfolded protein response optimizes protein production

M. Benisch, D. Benzinger, S. Kumar, H. Hu, M. Khammash

This study uses optogenetic feedback control to regulate the unfolded protein response in yeast, improving protein production yields by 60%.

bioRxiv · Oct 27, 2022Bioengineering

An inducible AraC that responds to blue light instead of arabinose

E. Romano, A. Baumschlager, E. B. Akmeric, N. Palanisamy, M. Houmani, G. Schmidt, M. A. Oeztuerk, L. Ernst, M. Khammash, B. Di Ventura

This paper introduces BLADE, a blue light-inducible AraC variant in E. coli that enables reversible control of gene expression and morphology, and uses it to study gene function and create bacteriographs.

Nature Chemical Biology · Apr 26, 2021Peer-reviewedMicrobiology

The probability distribution of the reconstructed phylogenetic tree with occurrence data

A. Gupta, M. Manceau, T. Vaughan, M. Khammash, T. Stadler

The paper derives a probability distribution for phylogenetic trees with occurrence data, enabling parameter estimation in epidemiology and macroevolution.

bioRxiv · Jun 21, 2019Evolutionary Biology