Author

M. Podar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:metagenomics· 3 Research Focus:ecology & biodiversity· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

C. M. Gionfriddo· 2 shared A. G. Bravo· 1 shared A. M. Wymore· 1 shared A. Soren· 1 shared A. Vigneron· 1 shared B. D. Peterson· 1 shared B. Gu· 1 shared C. C. Gilmour· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMicrobiology

C. M. Gionfriddo

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4 papers

Recent·Most cited

Transcriptional control of hgcAB by an ArsR-like regulator in Pseudodesulfovibrio mercurii ND132

C. M. Gionfriddo, A. Soren, A. M. Wymore, D. S. Hartnett, M. Podar, J. M. Parks, D. A. Elias, C. C. Gilmour

This paper investigates the transcriptional regulation of hgcAB by an ArsR-like regulator in Pseudodesulfovibrio mercurii ND132, revealing its link to arsenic resistance and mercury methylation.

bioRxiv · Oct 17, 2022 · PreprintMicrobiology

A consensus protocol for the recovery of mercury methylation genes from metagenomes

E. Capo, B. D. Peterson, M. Kim, D. S. Jones, S. G. Acinas, M. Amyot, S. Bertilsson, E. Bjorn, M. Buck, C. Cosio, D. Elias, C. Gilmour, M. Goni, B. Gu, H. Lin, , C. M. Gionfriddo

The paper presents a standardized protocol and bioinformatic pipeline for detecting and quantifying mercury methylation genes (hgcAB) in metagenomes, showing comparable efficiency between single and co-assembly approaches.

bioRxiv · Mar 14, 2022Microbiology

Microbial diversity and sulfur cycling in an early earth analogue: From ancient novelty to modern commonality

C. R. Hahn, I. Farag, C. Murphy, M. Podar, M. Elshahed, N. H. Youssef

The paper examines microbial diversity and sulfur cycling in an anoxic spring, showing ancient microbial lineages and processes that reflect early Earth conditions and the impact of oxygenation.

bioRxiv · Jul 5, 2021Microbiology

Comparative analysis of microbial diversity across temperature gradients in hot springs from Yellowstone and Iceland

P. T. Podar, Z. K. Yang, S. H. Bjornsdottir, M. Podar

The paper analyzes microbial diversity across temperature gradients in hot springs, finding that temperature, not location, drives community structure and that endemism occurs at the genus level in thermophilic phototrophs.

bioRxiv · Dec 11, 2019Microbiology