GenomicsbioRxiv
Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes
John A Lees, Minna Vehkala, Niko Välimäki…·Jukka Corander
This paper introduces SEER, a statistical method to identify sequence elements associated with bacterial phenotypes, demonstrating its application in discovering antibiotic resistance and invasiveness factors in Streptococcus species.
DOI 10.1038/ncomms12797