Author

Mathieu Le Gars

Stanford Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Assay:CITE-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Anne-Maud FerreiraiD· 1 shared C. HennequiniD· 1 shared Catherine A. BlishiD· 1 shared Christof SeileriD· 1 shared Claudia ChicaiD· 1 shared Elena VendrameiD· 1 shared Harriet CorvoliD· 1 shared J. GuitardiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Anne-Maud FerreiraORCID

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2 papers

Recent·Most cited

The epigenomic landscape of bronchial epithelial cells reveals the establishment of trained immunity

Jeanne Bigot, Rachel Legendre, Juliette Hamroune, Sébastien Jacques, Mathieu Le Gars, Nicolas Millet, Loïc Guillot, Harriet Corvol, C. Hennequin, J. Guitard, Jean‐Yves Coppée, Viviane Balloy, Claudia Chica

The paper identifies an epigenetic mechanism in bronchial epithelial cells that enables trained immunity through chromatin remodeling and gene expression changes following flagellin exposure.

Genes and Immunity · Sep 24, 2025Peer-reviewedGenetics

CytoGLMM: Conditional Differential Analysis for Flow and Mass Cytometry Experiments

Christof Seiler, Anne-Maud Ferreira, Lisa M. Kronstad, Laura J. Simpson, Mathieu Le Gars, Elena Vendrame, Catherine A. Blish, Susan Holmes

CytoGLMM provides statistical methods for differential analysis of flow and mass cytometry data, improving robustness to marker correlations and patient heterogeneity.

BMC Bioinformatics · Mar 22, 2021Peer-reviewedBioinformatics