Author

Q. Ali

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Bioengineering· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:host-pathogen & immune response· 3 Approach:statistical model· 3 Research Focus:benchmarking· 1 Approach:deep learning· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

U. Chaudhry· 3 shared I. Rashid· 2 shared N. D. Sargison· 2 shared A. Shaukat· 1 shared B. Jones· 1 shared G. Raynes· 1 shared I. Morrison· 1 shared K. Afshan· 1 shared

Activity by Year

2018-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersMicrobiology

U. Chaudhry

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Genetic characterisation of the Theileria annulata cytochrome b locus and its impact on buparvaquone resistance in ruminants

Q. Ali, O. Zahid, M. Mhadhbi, B. Jones, M. A. Darghouth, G. Raynes, K. Afshan, R. Birtles, N. D. Sargison, M. Betson, U. Chaudhry

This study identifies mutations in the cytochrome b locus of Theileria annulata associated with buparvaquone resistance and shows evidence of positive selection and haplotype spread in buffalo and cattle isolates.

bioRxiv · May 25, 2022 · PreprintMicrobiology

Development of a deep amplicon sequencing method to determine the proportional species composition of piroplasm haemoprotozoa as an aid in their control

U. Chaudhry, Q. Ali, I. Rashid, M. Z. Shabbir, M. Abbas, M. Numan, M. Evans, K. Ashraf, I. Morrison, L. Morrison, N. D. Sargison

The paper develops a deep amplicon sequencing method to quantify piroplasm species proportions in co-infections and introduces the concept of a 'haemoprotobiome'.

bioRxiv · Mar 18, 2019 · PreprintMicrobiology

Report on the spatial spread of defective interfering particles and its role in suppressing infectious particles

Q. Ali, R. Ke

The paper develops a spatio-temporal model to study how defective interfering particles suppress infectious virus spread within host tissues.

bioRxiv · Mar 6, 2019 · PreprintBioengineering

Selective sweep and phylogenetic models for the emergence and spread of pyrimethamine resistance mutations in Plasmodium vivax

A. Shaukat, Q. Ali, T. Connelley, M. A. Ullah Khan, M. A. Saleem, I. Rashid, N. Sargison, U. Chaudhry

The paper identifies positive selection pressure and selective sweeps for pyrimethamine resistance mutations in Plasmodium vivax in Pakistan, showing both single and recurrent emergence of resistance haplotypes.

bioRxiv · Oct 3, 2018Evolutionary Biology