Author

Qing Yang

Westlake University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 3 Neuroscience· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Approach:statistical model· 4 Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:scRNA-seq· 2 Approach:Bayesian inference· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Jinhong Lu· 3 shared Yanmei DouiD· 3 shared Yonghe Xia· 3 shared Huan Liu· 2 shared Mengdie Yao· 2 shared Wenxuan Fan· 2 shared Xiaoyu Ma· 2 shared Xing Wu· 2 shared

Activity by Year

2019-2026 · peak 5/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioinformatics

Jinhong Lu

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

A DERIVED RELAXATION CONTRAST FROM SYNTHETIC MRI FOR DETECTING NETWORK MICROSTRUCTURAL VULNERABILITY

Anupa Ekanayake, Scott N. Hwang, Senal Peiris, Rommy Elyan, Mustafa Ghulam, Mark Tülchinsky, Jianli Wang, Paul Eslinger, Qing Yang, Prasanna Karunanayaka

This paper introduces a synthetic MRI-derived contrast (FD) to detect microstructural changes in olfactory-limbic circuits associated with mild cognitive impairment.

bioRxiv · Apr 12, 2026 · PreprintNeuroscience

Unravelling genome-wide mosaic microsatellite mutations at single-cell resolution

Chunyi Wang, Wenxuan Fan, Weixiang Wang, Yonghe Xia, Jinhong Lu, Xiaoyu Ma, Jichuan Yu, Yunchao Zheng, Qing Yang, Meizhen Lin, X F Yu, Xushen Xiong, M Kellis, Qi Xie, Yanmei Dou, Data Group

The paper develops BayesMonSTR to detect mosaic STR mutations at single-cell resolution and finds increased STR indels in aging cells, particularly in prefrontal cortex neurons.

bioRxiv · Apr 5, 2026 · PreprintBioinformatics

Pluripotency Factors Modulate Interferon Signaling in Embryonic Stem Cells

Qing Yang, Mónica Padilla-Gálvez, Skyler A. Uhl, Julie Eggenberger, Sophie Kogut, Sara Becker, Shuibing Chen, Brad R. Rosenberg, Daniel Blanco-Melo

This study shows that pluripotency factors in hESCs regulate negative interferon regulators, suppressing interferon signaling to maintain pluripotency while preserving antiviral resistance.

bioRxiv · Mar 27, 2026 · PreprintImmunology

Detection of Somatic Point Mutations Directly from Spatial Transcriptomics Enables in vivo Spatiotemporal Lineage Tracing

Zhirui Yang, Mengdie Yao, Qing Yang, Yiheng Du, Jinhong Lu, Xing Wu, Jinran Lin, Zhuoyu Qian, Song Hu, Yonghe Xia, Huan Liu, Qiji Zhou, Xiaoyu Ma, Yan Luo, Wenxuan Fan, , Yanmei Dou

SpaceTracer detects somatic SNVs from spatial transcriptomics data to enable lineage tracing in human tissues, revealing tumor progression and immune cell migration.

bioRxiv · Feb 6, 2026 · PreprintBioinformatics

PhyloSOLID: Robust phylogeny reconstruction from single-cell data despite inherent error and sparsity

Qing Yang, Yuheng Liu, Jijian Yang, Xing Wu, Zhirui Yang, Yonghe Xia, Yunchao Zheng, Jinhong Lu, Mengdie Yao, Yiheng Du, Huan Liu, Nan Li, Yanmei Dou

PhyloSOLID improves phylogenetic reconstruction from single-cell data by addressing error and sparsity, achieving better accuracy than existing methods.

bioRxiv · Feb 6, 2026 · PreprintBioinformatics

A unified neurocognitive model of the anterior temporal lobe contributions to semantics, language, social behaviour & face recognition

Junhua Ding, Keliang Chen, Haoming Liu, Lin Huang, Yan Chen, Yingru Lv, Qing Yang, Qihao Guo, Zaizhu Han, Matthew A. Lambon Ralph

This study develops a unified neurocognitive model of anterior temporal lobe contributions to semantics, language, social behavior, and face recognition using data from semantic dementia patients.

bioRxiv · Aug 5, 2019 · PreprintNeuroscience