Author

S. A. Quinodoz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Approach:comparative / phylogenetic analysis· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

M. Guttman· 2 shared A. Bruckner· 1 shared A. Yildirim· 1 shared C. P. Brangwynne· 1 shared D. R. Miller· 1 shared D. S. W. Lee· 1 shared E. H. Finn· 1 shared F. Alber· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersEvolutionary Biology

M. Guttman

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Evolutionary BiologyCellPeer-reviewedJul 1, 2024

The genomic and cellular basis of biosynthetic innovation in rove beetles

S. A. Kitchen, T. H. Naragon, A. Bruckner…·J. Parker

This study investigates the genomic and cellular basis of biosynthetic innovation in rove beetles, identifying key genomic and cellular mechanisms underlying the evolution of defensive secretions.

DOI 10.1016/j.cell.2024.05.012

multiple speciesbulk RNA-seq

𝕏 PostBluesky

BiophysicsbioRxivDec 31, 2021

Viscoelastic RNA entanglement and advective flow underlie nucleolar form and function

J. A. Riback, J. M. Eeftens, D. S. W. Lee…·C. P. Brangwynne

The paper maps nucleolar rRNA dynamics using imaging and modeling, finding that rRNA moves radially due to viscoelastic properties and polymerization, leading to a new model for rRNA release.

DOI 10.1016/j.molcel.2023.08.006

imagingmicroscopy & imaging analysis

𝕏 PostBluesky

BiophysicsbioRxivAug 22, 2021

Integrative Genome Modeling Platform reveals essentialityof rare contact events in 3D genome organizations

L. Boninsegna, A. Yildirim, G. Polles…·F. Alber

The paper develops a multi-modal data integration approach to improve genome structure modeling and shows that rare contact events are essential for predicting nuclear architecture.

DOI 10.1038/s41592-022-01527-x

Hi-Cdeep learning

𝕏 PostBluesky