Author

S. J. Shepherd

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Assay:imaging· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Brestovitsky· 1 shared A. R. MacLean· 1 shared D. Barragan· 1 shared D. Ezer· 1 shared D. Issadore· 1 shared D. N. Rosario Berrios· 1 shared D. P. Cormode· 1 shared E. J. Goldstein· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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1 shared paperPlant Biology

A. Brestovitsky

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Author profile →

3 papers

Recent·Most cited

Towards the Clinical Translation of a Silver Sulfide Nanoparticle Contrast Agent: Large Scale Production with a Highly Parallelized Microfluidic Chip

K. J. Mossburg, S. J. Shepherd, D. Barragan, N. H. O, E. K. Berkow, P. S. N. Maidment, D. N. Rosario Berrios, J. C. Hsu, M. J. Siedlick, S. Yadavali, M. J. Mitchell, D. Issadore, D. P. Cormode

This paper develops a scalable microfluidic method to produce silver sulfide nanoparticles for clinical imaging, showing high-quality output and efficient in vivo clearance.

bioRxiv · Dec 2, 2023Bioengineering

Integrating Patient And Whole Genome Sequencing Data To Provide Insights Into The Epidemiology Of Seasonal Influenza A(H3N2) Viruses

E. J. Goldstein, W. T. Harvey, G. S. Wilkie, S. J. Shepherd, A. R. MacLean, P. R. Murcia, R. N. Gunson

This study integrates patient and whole genome sequencing data to analyze the epidemiology of seasonal influenza A(H3N2) viruses, finding that reassortant viruses are associated with severe cases and later seasonality.

Microbial Genomics · Jan 1, 2018Peer-reviewedMicrobiology

The G-box transcriptional regulatory code in Arabidopsis

D. Ezer, S. J. Shepherd, A. Brestovitsky, P. Dickinson, S. Cortijo, V. Charoensawan, M. S. Box, S. Biswas, P. Wigge

The paper constructs a gene regulatory network for G-box motifs in Arabidopsis, showing that flanking sequences influence specificity and presenting a resource for regulatory predictions.

bioRxiv · Apr 18, 2017Plant Biology