Author

S. P. Smith

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

A. J. Enright· 1 shared A. Rokas· 1 shared A. Viros· 1 shared C. G. Scarpini· 1 shared C. Gaudy-Marqueste· 1 shared C. Varnai· 1 shared E. L. Drane· 1 shared E. Nagore· 1 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperCancer Biology

A. J. Enright

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Three-dimensional interactions between integrated HPV genomes and cellular chromatin dysregulate host gene expression in early cervical carcinogenesis

I. J. Groves, E. L. Drane, M. Michalski, J. M. Monahan, C. G. Scarpini, S. P. Smith, G. Bussotti, C. Varnai, S. Schoenfelder, P. Fraser, A. J. Enright, N. Coleman

This study shows HPV integration disrupts host gene expression by altering 3D chromatin interactions, revealing a mechanism for early cervical cancer development.

bioRxiv · Feb 3, 2021Cancer Biology

MOLECULAR LANDSCAPE OF OLD AGE MELANOMA BY SURVIVAL AND IMMUNOTHERAPY RESPONSE

S. P. Smith, E. Nagore, T. Budden, R. Kumar, R. Marais, C. Gaudy-Marqueste, A. Viros

This study identifies age-specific mutations and transcriptomic changes in melanoma linked to survival and immunotherapy response, showing that certain mutations improve survival in older patients treated with immunotherapy.

bioRxiv · Jan 27, 2021 · PreprintCancer Biology

Genome wide association analysis uncovers variants for reproductive variation across dog breeds and links to domestication

S. P. Smith, J. B. Phillips, M. L. Johnson, P. Abbot, J. A. Capra, A. Rokas

This study identifies genetic variants associated with reproductive traits in dogs and links them to domestication-related traits.

bioRxiv · Dec 19, 2018Evolutionary Biology