Author

Shannon Conroy

University of Basel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1 Assay:metabolomics· 1

Frequent Co-Authors

Alexander SchmidtiD· 1 shared Barbara M. GrüneriD· 1 shared Daniel E. HoffmanniD· 1 shared Emanuelle Lezan· 1 shared Enea MaffeiiD· 1 shared Erik Ahrné· 1 shared Hector Arturo Hernandez GonzaleziD· 1 shared Isabella SantiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMicrobiology

Alexander SchmidtORCID

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2 papers

Recent·Most cited

Uncertainty-aware quantitative analysis of high-throughput live cell migration data

Simo Kitanovski, Shannon Conroy, Justin Sonneck, Lukas Claas, Madeleine Dorsch, Sebastian Urban, Jianxu Chen, Markus Kaiser, Barbara M. Grüner, Daniel E. Hoffmann

The paper introduces cellmig, a Bayesian tool for quantifying cell migration velocity with uncertainty, improving reproducibility and biological insight in high-throughput assays.

PLoS Computational Biology · Jul 13, 2026Peer-reviewedBioinformatics

Coenzyme A depletion causes antibiotic tolerance in Pseudomonas aeruginosa

Pablo Manfredi, Isabella Santi, Enea Maffei, Hector Arturo Hernandez Gonzalez, Shannon Conroy, Emanuelle Lezan, Erik Ahrné, Nicole Thürkauf, Simon van Vliet, Nicola Zamboni, Alexander Schmidt, Urs Jenal

This study identifies coenzyme A depletion as a cause of antibiotic tolerance in Pseudomonas aeruginosa using proteomic, metabolomic, and machine learning analyses.

bioRxiv · Oct 24, 2025 · PreprintMicrobiology