Author

Shuang Chen

China Pharmaceutical University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Aihua ZhangiD· 1 shared Chunhua ZhuiD· 1 shared Daoyou Chen· 1 shared Enrico G. PetrettoiD· 1 shared Hai QianiD· 1 shared Huimei CheniD· 1 shared Juncheng Qian· 1 shared Ruiqi Lin· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Aihua ZhangORCID

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2 papers

Recent·Most cited

Decoding antibody-antigen recognition: the BL8 language and its application in calibrating deep learning predictions

Tingwei Miao, Ruohan Zhu, Ruiqi Lin, Juncheng Qian, Yi Feng, Shuang Chen, Yuxin Wang, Daoyou Chen, Yanling Wu, Tianlei Ying

This paper introduces BL8, a structural language to evaluate deep learning predictions of antibody-antigen interactions, revealing false positives and enabling reliable consensus predictions.

bioRxiv · Nov 2, 2026 · PreprintImmunology

Spatial transcriptomics reveals injury responsive compartments and coordinated immune fibrotic signaling in ANCA associated renal vasculitis

Yucheng Tang, Chunhua Zhu, Shuang Chen, Huimei Chen, Hai Qian, Aihua Zhang, Enrico G. Petretto

This study uses spatial transcriptomics to identify disease-responsive compartments and immune-fibrotic signaling in AAV kidney biopsies, linking them to histopathology and fibrotic injury.

Frontiers in Immunology · Jul 31, 2026Peer-reviewedBioinformatics