Author

Tien Phan-Everson

Nanostring Technologies (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 2 Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Approach:experimental assay· 2 Assay:proteomics· 2 Assay:spatial transcriptomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Ali H. BrivanlouiD· 2 shared Anna YoneyiD· 2 shared Fred EtociD· 2 shared Shu LiiD· 2 shared Albert Ruzo· 1 shared Alecksandr J. Kutchma· 1 shared Alyssa B. RosenbloomiD· 1 shared Andrew Klock· 1 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersDevelopmental Biology

Ali H. BrivanlouORCID

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Author profile →

4 papers

Recent·Most cited

A Machine Learning One-Class Logistic Regression Model to Predict Stemness in Single Cell Transcriptomics and Spatial Omics Datasets

Felipe Segato Dezem, Maycon Marção, Bassem Ben Cheikh, Nadya Nikulina, Ayodele J. Omotoso, Destiny B. Burnett, Priscila Campos dos Santos Coelho, Simone Badal, Judith Hurley, Carmen Gómez, Tien Phan-Everson, Giang Ong, Luciano Gastón Martelotto, Zachary R. Lewis, Sophia George, , Jasmine Plummer

The paper applies a one-class logistic regression model to predict stemness in single-cell and spatial omics datasets without requiring cell annotation.

BMC Genomics · Nov 28, 2023Peer-reviewedGenomics

High-plex Multiomic Analysis in FFPE at Subcellular Level by Spatial Molecular Imaging

Shanshan He, Ruchir Bhatt, Carl Brown, Emily A. Brown, Derek L. Buhr, Kan Chantranuvatana, Patrick J. Danaher, Dwayne L. Dunaway, Ryan G. Garrison, Gary K. Geiss, Mark Gregory, Margaret L. Hoang, Rustem Khafizov, Emily E. Killingbeck, Dae Joon Kim, , Joseph Beechem

An automated in-situ imaging platform reads 980 RNAs and 108 proteins in FFPE tissue at subcellular resolution, with 0.0092 false calls per cell; 800,000-plus cells released publicly.

bioRxiv · Nov 3, 2021 · PreprintGenomics

Huntingtin CAG expansion impairs germ layer patterning in synthetic human gastruloids through polarity defects.

Szilvia Galgoczi, Albert Ruzo, Christian Markopoulos, Anna Yoney, Tien Phan-Everson, Shu Li, Tomomi Haremaki, Jakob Johannes Metzger, Fred Etoc, Ali H. Brivanlou

This study shows that HTT-CAG expansion in human gastruloids causes ectodermal compartment reduction and altered TGFβ signaling due to polarity defects, indicating early developmental HD effects.

Development · Oct 1, 2021Peer-reviewedDevelopmental Biology

Differential compartmentalization of BMP4/NOGGIN requires NOGGIN trans-epithelial transport

Tien Phan-Everson, Fred Etoc, Shu Li, Samuel Khodursky, Anna Yoney, Ali H. Brivanlou, Eric D. Siggia

The paper shows that NOGGIN and BMP4 are secreted into opposite extracellular spaces in human epiblasts, with NOGGIN inhibiting BMP4 through apical-to-basal transcytosis.

Developmental Cell · May 27, 2021Peer-reviewedDevelopmental Biology