Author

Ting Liu

Northwestern University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Developmental Biology· 1 Molecular Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:mouse· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

Kazushi AotoiD· 2 shared Naoto UjiieiD· 2 shared Pieter R. NordeniD· 2 shared Tsutomu KumeiD· 2 shared Can TaniD· 1 shared Chenyang Zhu· 1 shared Hai-Jun Li· 1 shared Hao F. ZhangiD· 1 shared

Activity by Year

2014-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMolecular Biology

Kazushi AotoORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

BioMeme: biological response memory for virtual cells

Jia Bi, Chenyang Zhu, Haochen Liu, Yufei Wang, Ting Liu, Xinqi Bao, Runshan Hu, Jeyan Thiyagalingam, Steve R. Gunn

BioMeme predicts cell responses to new perturbations by recalling measured experiments, outperforming neural models in accuracy and speed.

bioRxiv · Nov 9, 2026 · PreprintBioinformatics

Endothelial FOXC1 and FOXC2 promote intestinal regeneration after ischemia-reperfusion injury

Can Tan, Pieter R. Norden, Wei Yu, Ting Liu, Naoto Ujiie, Sun Kyong Lee, Xiaocai Yan, Yaryna Dyakiv, Kazushi Aoto, Sagrario Ortega, Isabelle G. De Plaen, Venkatesh Sampath, Tsutomu Kume

This study identifies FOXC1 and FOXC2 as essential regulators of intestinal regeneration after ischemia-reperfusion injury by promoting paracrine signaling from endothelial cells.

EMBO Reports · May 8, 2023Peer-reviewedMolecular Biology

Differential roles of neural crest- and endothelial-derived FOXC2 in trabecular meshwork and Schlemms Canal in glaucomatous pathology

Pieter R. Norden, Lisa Beckmann, Raymond S. Fang, Naoto Ujiie, Zhen Cai, Xian Zhang, Junghun Kweon, Ting Liu, Kazushi Aoto, Susan E. Quaggin, Hao F. Zhang, Tsutomu Kume

The paper investigates the role of FOXC2 in neural crest- and endothelial-derived cells in the trabecular meshwork and Schlemms Canal, showing its importance in development and maintenance of the aqueous humor outflow pathway in glaucoma.

bioRxiv · Feb 20, 2022 · PreprintDevelopmental Biology

A microRNA profile in Fmr1 knockout mice reveals microRNA expression alterations with possible roles in fragile X syndrome

Ting Liu, Rui-Ping Wan, Ling-Jia Tang, Shu-Jing Liu, Hai-Jun Li, Qi-Hua Zhao, Wei-Ping Liao, Xiao-Fang Sun, Yong-Hong Yi, Yue-Sheng Long

This study identifies miRNA expression changes in Fmr1 knockout mice, suggesting FMRP regulates miRNA processing and contributes to FXS pathology.

bioRxiv · Jan 26, 2014Neuroscience