Author

Tingze Feng

Dalian Institute of Chemical Physics

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:benchmark study· 1 Assay:metagenomics· 1 Organism:multiple species· 1 Assay:scRNA-seq· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Erqiang HuiD· 1 shared Guangchuang YuiD· 1 shared H Y LiniD· 1 shared Lang ZhouiD· 1 shared Li ZhaniD· 1 shared Liping Ren· 1 shared Meijun CheniD· 1 shared Pingfan Guo· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Erqiang HuORCID

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2 papers

Recent·Most cited

Context-dependent utility and robustness of pretrained single-cell foundation model representations across analytical tasks

Tianyuan Liu, Tingze Feng, Xianrun Pan, Yangyang Chen, Liping Ren, Xiucai Ye, H Y Lin, Yu Zhang

This study evaluates the zero-shot performance of single-cell foundation models across tasks and datasets, showing task-dependent utility and structural robustness vary with dataset characteristics.

bioRxiv · Jul 13, 2026 · PreprintBioinformatics

clusterProfiler: An universal enrichment tool for functional and comparative study

Tianzhi Wu, Erqiang Hu, Shuangbin Xu, Meijun Chen, Pingfan Guo, Zehan Dai, Tingze Feng, Lang Zhou, Wenli Tang, Li Zhan, Xiaocong Fu, Shanshan Liu, Xiaochen Bo, Guangchuang Yu

clusterProfiler performs over-representation (Fisher's exact test) and gene set enrichment analyses on Gene Ontology, KEGG, and user-supplied annotations, supporting non-model organisms, multi-condition comparisons, and ggplot2-based visualization.

The Innovation · Jul 1, 2021Peer-reviewedBioinformatics✦ In-depth digest