Author

Tyler Arsimendi

Santa Clara University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Andrew J. GorzalskiiD· 1 shared Craig M. StephensiD· 1 shared David C. HessiD· 1 shared Eileen Wagner· 1 shared Farid TadrosiD· 1 shared Jared Lumpe· 1 shared Joel R. SevinskyiD· 1 shared Kevin G. LibuitiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Andrew J. GorzalskiORCID

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1 paper

Recent·Most cited

BioinformaticsPLoS ONEPeer-reviewedFeb 16, 2023

GAMBIT (Genomic Approximation Method for Bacterial Identification and Tracking): A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification

Jared Lumpe, Lynette Gumbleton, Andrew J. Gorzalski…·Mark Pandori

GAMBIT uses k-mer based strategies and a curated database to identify bacteria from whole genome sequencing with confidence thresholds to reduce false identifications.

32 citationstop 2%

bacteria (other)whole-genome sequencing

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