Zejun Yang

Integrated optimization of experimental and computational workflows improves genome recovery in long-read gut metagenomics

Complete genome-derived metabolic interactions reveal impact of gut ecology on human health

This study uses complete genomes to model gut microbiome metabolic interactions, revealing ecological group dynamics linked to inflammatory bowel disease and improving disease diagnosis.

Complete Genomes of Cultivated Gut Bacteria Reveal Mobile Genetic Element-Driven Functional Diversity with Therapeutic Implications

The paper presents a comprehensive compendium of fully circularized human gut bacterial genomes and reveals how mobile genetic elements drive functional diversity with therapeutic implications.

Deep generative model for protein subcellular localization prediction

This paper introduces deepGPS, a deep generative model that predicts protein subcellular localization using both sequence and image data, providing textual and image outputs.

Genomics-FM: Universal Foundation Model for Versatile andData-Efficient Functional Genomic Analysis

Genomics-FM is a foundation model that reduces reliance on labeled data and outperforms existing models in genome annotation, epigenomic prediction, and variant effect assessment.