Lifeng Qiao

IntelliFold-2 improves protein structure prediction accuracy and robustness over AlphaFold 3 using architectural refinements and structural consistency, with strong gains in antibody-antigen and protein-ligand interactions.

FoldBench evaluates all-atom biomolecular structure prediction models across nine tasks, revealing performance gaps and highlighting AlphaFold 3's superiority.

Genomics-FM is a foundation model that reduces reliance on labeled data and outperforms existing models in genome annotation, epigenomic prediction, and variant effect assessment.

BEACON introduces a comprehensive RNA benchmark to evaluate deep learning models, finding that single nucleotide tokenization and ALiBi improve performance.