Author

Debbie Lindsay Shawcross

King's College LondonORCID 0000-0001-6133-4619Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1 Physiology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Assay:metabolomics· 1

Frequent Co-Authors

Gordon ProctoriD· 2 shared Lindsey Ann EdwardsiD· 2 shared Mathias UhléniD· 2 shared Saeed ShoaieiD· 2 shared Sunjae LeeiD· 2 shared Adil MardinoğluiD· 1 shared Aleksander Krag· 1 shared Ane Zamalloa· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersPhysiology

Gordon ProctorORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

PhysiologyJournal of HepatologyPeer-reviewedOct 22, 2024

Pathogenic entero- and salivatypes harbour changes in microbiome virulence and antimicrobial resistance genes with increasing chronic liver disease severity

Sunjae Lee, Bethlehem Arefaine, Neelu Begum…·Vishal C Patel

The paper identifies changes in oral and gut microbiome virulence and antimicrobial resistance genes associated with increasing severity of chronic liver disease.

57 citationstop 2%

humanmetagenomics

𝕏 PostBluesky

MicrobiologybioRxivPreprintAug 13, 2024

Refined Enterotyping Reveals Dysbiosis in Global Fecal Metagenomes

Marisa Isabell Keller, Suguru Nishijima, Daniel Podlesny…·Peer Bork

The paper refines enterotypes in global fecal metagenomes using fuzzy clustering and introduces an Enterotype Dysbiosis Score to assess disease associations.

16 citations

humanmetagenomics

𝕏 PostBluesky

Systems BiologybioRxivPreprintFeb 1, 2021

The Reactobiome Unravels a New Paradigm in Human Gut Microbiome Metabolism

Gholamreza Bidkhori, Sunjae Lee, Lindsey Ann Edwards…·Saeed Shoaie

The paper introduces the reactobiome, a stratification method for the human gut microbiome, identifying five reactotypes with distinct metabolic features and validating them in a longitudinal cohort.

16 citations

humanmetagenomics

𝕏 PostBluesky