Author

Luca Zoccarato

BOKU UniversityORCID 0000-0001-8914-6396Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 2 Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Daniel SheriD· 2 shared Osnat WeissbergiD· 2 shared Waseem Bashir Valiya KalladiiD· 2 shared Alhan Abu Hamoud· 1 shared Alon DayaiD· 1 shared Aron KleiniD· 1 shared Carolina Alejandra Martinez Gutierrez· 1 shared Coco KoedooderiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersMicrobiology

Daniel SherORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 1, 2026

Giant bacteria in gut microbiomes

Yiang Lyu, Marit Gruener, Aron Klein…·Danny Ionescu

This study identifies Epulopiscium spp. in diverse hosts, including humans, and shows their abundance varies with age and disease states.

DOI 10.64898/2026.09.30.750856

𝕏 PostBluesky

MicrobiologybioRxivPreprintNov 25, 2025

Biological insights and methodological challenges learned from working with a diverse heterotrophic marine bacterial library

Waseem Bashir Valiya Kalladi, Melisa L. Osborne, Helen Scott…·Daniel Sher

The paper establishes and characterizes a marine bacterial library, identifying genetic variations, growth patterns, and methodological challenges in strain maintenance and analysis.

1 citation

proteomicsmetagenomics

𝕏 PostBluesky

MicrobiologyPLoS ONEPeer-reviewedApr 24, 2025

Collaborative metabolic curation of an emerging model marine bacterium, Alteromonas macleodii ATCC 27126

Daniel Sher, Emma E. George, Matthias Wietz…·Lisa R. Moore

The paper describes a collaborative curation workshop to improve the metabolic reconstruction of Alteromonas macleodii ATCC 27126 using genomic and physiological data, identifying key metabolic pathways and gaps.

6 citations

bacteria (other)whole-genome sequencing

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