Author

Marie Cargnello

Centre National de la Recherche ScientifiqueORCID 0000-0002-1060-0478Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Anne CammasiD· 1 shared Beatriz Hernández SuáreziD· 1 shared Carl MurieiD· 1 shared Christian OertliniD· 1 shared David MonchaudiD· 1 shared Erik DassiiD· 1 shared Ivan TopisirovićiD· 1 shared Julie Lorent· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperCancer Biology

Anne CammasORCID

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2 papers

Recent·Most cited

Cancer BiologyNature CommunicationsPeer-reviewedApr 7, 2025

RNA G-quadruplex dynamic steers the crosstalk between protein synthesis and energy metabolism

Leïla Dumas, Sauyeun Shin, Quentin Rigaud…·Stefania Millevoi

The paper shows RNA G-quadruplexes regulate mitochondrial function by modulating cytoplasmic mRNA translation of nuclear-encoded mitochondrial proteins, impacting energy metabolism and cancer cell proliferation.

23 citationstop 4%

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsNucleic Acids ResearchPeer-reviewedMar 28, 2019

Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq

Christian Oertlin, Julie Lorent, Valentina Gandin…·Ola Segnestam Larsson

The paper introduces anota2seq, an algorithm for analyzing translational efficiency from ribosome or polysome profiling data, revealing translational buffering and mTOR-dependent gene regulation.

107 citationstop 3%

bulk RNA-seqstatistical model

𝕏 PostBluesky