Author

Alister P. W. Funnell

Altius Institute for Biomedical SciencesORCID 0000-0002-1062-5296Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Cell Biology· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Daniel BatesiD· 2 shared Alexander Joel FederationiD· 1 shared Àlvaro Quintanal-VillalongaiD· 1 shared Andrea ArfèiD· 1 shared Anna Ritá MigliaccioiD· 1 shared Arielle ElkriefiD· 1 shared Barbara Vaz de MelloiD· 1 shared Benjamin P. Van Biber· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersCancer Biology

Daniel BatesORCID

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3 papers

Recent·Most cited

Cancer BiologyTranslational OncologyPeer-reviewedJul 20, 2026

SMARCA4, STK11, and KEAP1 co-inactivation associates with poor prognosis and upregulation of the TGF-β pathway in lung adenocarcinoma

Emily A. Costa, Barbara Vaz de Mello, Corrin A. Wohlhieter…·Charles M. Rudin

The paper identifies SMARCA4/STK11/KEAP1 triple mutant lung adenocarcinoma as a poor prognosis subset and links it to TGF-β pathway activation.

DOI 10.1016/j.tranon.2026.102915

humanbulk RNA-seq

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Cell BiologyStem CellsPeer-reviewedAug 7, 2024

The glucocorticoid receptor elicited proliferative response in human erythropoiesis is BCL11A-dependent

Maria Mazzarini, Jennifer M. Cherone, Truong Nguyen…·Anna Ritá Migliaccio

The paper shows BCL11A is required for glucocorticoid-induced erythroid expansion in human cells.

6 citations

humanbulk RNA-seq

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Synthetic BiologybioRxivPreprintFeb 19, 2020

Quantitative dialing of gene expression via precision targeting of KRAB repressor

Matthew S. Wilken, Christie Ciarlo, Jocelynn R. Pearl…·John A. Stamatoyannopoulos

This study demonstrates precise control of gene expression levels by targeting the KRAB repressor domain in human cells.

4 citations

humanexperimental assay

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