Author

Canan Fırat

Memorial Sloan Kettering Cancer CenterORCID 0000-0002-4731-1303Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 3

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:imaging· 2 Research Focus:protein structure prediction· 2 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Approach:microscopy & imaging analysis· 1

Frequent Co-Authors

Jinru ShiaiD· 3 shared Anna MatveevaiD· 2 shared Batuhan KısakoliD· 2 shared Daniel B. LongleyiD· 2 shared Fiona GintyiD· 2 shared Jochen H.M. PrehniD· 2 shared Manuela SalvucciiD· 2 shared Mohammadreza AzimiiD· 2 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersCancer Biology

Jinru ShiaORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMar 3, 2026

A neural network model delivers a highly prognostic protein signature in cancer stem cells that identifies relapse in stage III colorectal cancer patients.

Anna Matveeva, Sanghee Cho, Manuela Salvucci…·Jochen H.M. Prehn

This paper identifies a five-protein stem cell signature using a deep neural network that predicts relapse in stage III colorectal cancer patients.

1 citation

𝕏 PostBluesky

Cancer BiologybioRxivPreprintFeb 17, 2025

Paired primary-metastasis patient-derived organoids and mouse models identify phenotypic evolution and druggable dependencies of peritoneal metastasis from appendiceal cancer

Ahmed Mahmoud, Philip H. Choi, Christine Sukhwa…·Karuna Ganesh

The paper develops patient-derived organoids and mouse models of appendiceal cancer to identify phenotypic changes and drug targets in peritoneal metastasis.

DOI 10.1101/2025.02.17.638725

humanorganoid / primary culture

𝕏 PostBluesky

Cancer BiologyThe Journal of PathologyPeer-reviewedAug 2, 2024

Spatial Effects of Infiltrating T cells on Neighbouring Cancer Cells and Prognosis in Stage III CRC patients

Mohammadreza Azimi, Sanghee Cho, Emir Bozkurt…·Jochen H.M. Prehn

The paper investigates the spatial relationship between T cells and cancer cells in stage III CRC patients, finding that closer proximity of T cells to cancer cells is associated with better disease-free survival.

8 citations

𝕏 PostBluesky