Author

Xiongbin Lu

Indiana University IndianapolisORCID 0000-0002-7987-9825Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:deconvolution· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Changlin WaniD· 2 shared Chi ZhangiD· 2 shared Sha CaoiD· 2 shared Szu-wei Tu· 2 shared Wennan ChangiD· 2 shared Xiaoyu LuiD· 2 shared Yong ZangiD· 2 shared Anru R. ZhangiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

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10 top collaborators · 43 mutual co-author links

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2 shared papersBioinformatics

Changlin WanORCID

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2 papers

Recent·Most cited

BioinformaticsBriefings in BioinformaticsPeer-reviewedOct 12, 2020

SSMD: A semi-supervised approach for a robust cell type identification and deconvolution of mouse transcriptomics data

Xiaoyu Lu, Szu-wei Tu, Wennan Chang…·Chi Zhang

SSMD improves cell type identification and deconvolution in mouse transcriptomics by addressing variations in genetics, experimental platforms, and small sample sizes.

6 citations

mousebulk RNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintDec 5, 2019

A semi-supervised approach for cell phenotypic and functional estimation in tissue microenvironment

Wennan Chang, Changlin Wan, Xiaoyu Lu…·Chi Zhang

ICTD improves tissue microenvironment analysis by enhancing cell type identification, marker gene discovery, and functional inference through a semi-supervised deconvolution approach.

9 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky