Author

Raphael M. Kudela

University of California, Santa CruzORCID 0000-0002-8640-1205Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Ecology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1

Frequent Co-Authors

Alexander BailessiD· 1 shared Andrew Ellis AlleniD· 1 shared Andrew H. BarnardiD· 1 shared Ariel J. RabinesiD· 1 shared Bethany Cristine KolodyiD· 1 shared Bradley S. MooreiD· 1 shared Brian D. BilliD· 1 shared Chase C. JamesiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperEcology

Alexander BailessORCID

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2 papers

Recent·Most cited

EcologyHarmful AlgaePeer-reviewedAug 22, 2026

Hyperspectral Remote Sensing for Harmful Algal Bloom Detection: Pseudo-nitzschia in the Northeast Pacific

Alexander Bailess, Nicholas Baetge, Andrew H. Barnard…·Maria T. Kavanaugh

This study uses hyperspectral remote sensing to detect harmful algal blooms by analyzing spectral fingerprints of diatoms, showing Pseudo-nitzschia can be distinguished from other diatoms.

DOI 10.1016/j.hal.2026.103195

imagingstatistical model

𝕏 PostBluesky

EcologyProceedings of the National Academy of SciencesPeer-reviewedSep 19, 2024

Molecular Forecasting of Domoic Acid during a Pervasive Toxic Diatom Bloom

John K. Brunson, Monica Thukral, John P. Ryan…·Andrew Ellis Allen

The paper identifies molecular predictors of domoic acid production during a harmful algal bloom and links iron and silica co-limitation to bloom dynamics and toxicity.

52 citationstop 2%

bulk RNA-seqstatistical model

𝕏 PostBluesky