Author

Dustin Machi

Virginia TechORCID 0000-0002-9081-6526Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Andrew S. WarreniD· 2 shared Alice R. Wattam· 1 shared Alice Rebecca WattamiD· 1 shared Brian Brunk· 1 shared Bruno Sobral· 1 shared Chunhong Mao· 1 shared Cristina Aurrecoechea· 1 shared Daniel LawsoniD· 1 shared

Activity by Year

2015-2017 · peak 1/yr

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10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Andrew S. WarrenORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 8, 2017

Panaconda: Application of pan-synteny graph models to genome content analysis

Andrew S. Warren, James J. Davis, Alice Rebecca Wattam…·Lenwood S. Heath

The paper introduces a pan-synteny graph method for analyzing multiple prokaryotic genomes, enabling the identification of genomic changes and conservation patterns without a reference genome.

6 citations

bacteria (other)whole-genome sequencing

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedJan 7, 2015

RNA-Rocket: An RNA-Seq Analysis Resource for Infectious Disease Research

Andrew S. Warren, Cristina Aurrecoechea, Brian Brunk…·Bruno Sobral

RNA-Rocket provides RNA-Seq and ChIP-Seq analysis tools for infectious disease research, offering pre-indexed genomes, educational resources, and integration with bioinformatics platforms.

DOI 10.1093/bioinformatics/btv002

bulk RNA-seqChIP-seq

𝕏 PostBluesky