Author

James Clark

University of BristolORCID 0000-0003-2896-1631Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

James Clark3 papers · University of Oxford

Biology Disciplines

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Evolutionary Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 2 Assay:ATAC-seq· 1 Organism:bacteria (other)· 1 Approach:Bayesian inference· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Davide PisaniiD· 2 shared Philip C. J. DonoghueiD· 2 shared Adrián A. Davín· 1 shared Alan J. S. BeavaniD· 1 shared Alex de MendozaiD· 1 shared Anja SpangiD· 1 shared Bastian FrommiD· 1 shared Bastien BoussauiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersGenomics

Davide PisaniORCID

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2 papers

Recent·Most cited

GenomicsNature Ecology & EvolutionPeer-reviewedJan 12, 2024

✦ In-depth digest

Hagfish genome illuminates vertebrate whole genome duplications and their evolutionary consequences

Daqi Yu, Yandong Ren, Masahiro Uesaka…·Juan Pascual‐Anaya

Chromosome-scale inshore hagfish genome places 1R before the cyclostome-gnathostome split and 2R in the gnathostome stem, and reveals two cyclostome-specific duplications (CR1, CR2).

146 citationstop 1%

multiple speciesnon-human primate

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintAug 8, 2023

An evolutionary timescale for Bacteria calibrated using the Great Oxidation Event

Adrián A. Davín, Ben J. Woodcroft, Rochelle M. Soo…·Gergely J. Szöllősi

This paper uses machine learning and phylogenetic reconciliation to estimate the evolutionary timeline of Bacteria, linking transitions to aerobic lifestyles to the Great Oxidation Event.

DOI 10.1101/2023.08.08.552427

bacteria (other)machine learning (classical)

𝕏 PostBluesky