Petra Bächer

This study maps immune responses to fungal antigens in IBD using T cell repertoire sequencing and PhIP-Seq, identifying T cell clonotypes and antibody responses against S. cerevisiae proteins.

This study integrates multi-omic and multimodal data from IBD patients to identify molecular, histopathological, and clinical features associated with inflammatory bowel diseases.

This study identifies a fungal commensal that competes with Candida albicans to reduce its burden and mitigate candidiasis in mice.

The paper develops PIA-M, a multimodal transformer-based tool for predicting HLA-II peptide presentation, achieving higher accuracy and faster runtime than existing methods.

The paper introduces an efficient algorithm for clustering T cell receptor sequences, outperforming GLIPH in speed and accuracy on real datasets.