Author

Hermione E Allen

The University of MelbourneORCID 0009-0006-1884-1395Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:proteomics· 1

Frequent Co-Authors

Adele Kay FieldingiD· 1 shared Aditi DeyiD· 1 shared Ayse U. AkarcaiD· 1 shared Bryan Lye· 1 shared David AutyiD· 1 shared Emily A. CutleriD· 1 shared Fatemeh VafaeeiD· 1 shared James McKenna· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

Adele Kay FieldingORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 5, 2025

Uncertainty-Aware Deep Learning for Multi-Metric and Dose-Specific Prediction of Drug Synergy

Muhammad Javad Heydari, Bryan Lye, Parvin Mansouri…·Fatemeh Vafaee

AlgoraeOS predicts drug synergy with dose-specific inhibition profiles and uncertainty estimates, achieving strong performance across diverse tissues and drug mechanisms.

DOI 10.1101/2025.11.05.686895

proteomicsdeep learning

𝕏 PostBluesky

Cancer BiologyBlood AdvancesPeer-reviewedSep 3, 2024

Mitochondrial dsRNA from B-ALL cells stimulates mesenchymal stromal cells to become cancer associated fibroblasts

Richard J. Burt, Aditi Dey, Ayse U. Akarca…·Adele Kay Fielding

This study shows that mitochondrial dsRNA from B-ALL cells triggers MSC to become CAFs, linking genetic subtypes to survival outcomes.

13 citations

humanbulk RNA-seq

𝕏 PostBluesky