A list by @biology · 1 papers · 0 followers
Jillian V. Berry, Bryan M Tran, Ginny Wu…·Xiangmin Xu
The paper describes a multi-institutional program for collecting neurotypical human brains to support multiomic brain cell atlas studies, highlighting challenges and opportunities for donor recruitment.
Papers closest to the centre of this list, not already in it.
Jason M. Webster, Ali Shojaie, Yiqin Alicia Shen…·Thomas J. Grabowski
The paper introduces a pipeline to create 3D spatial atlases for brain tissue samples, enabling standardized referencing and integration across biorepositories and neuroimaging data.
Joseph R. Ecker, Michael Hawrylycz, Ed S. Lein…·Guo‐Qiang Zhang
The paper presents a cross-species, multimodal atlas of the basal ganglia using single-cell transcriptomics and integrates epigenomic and spatial genomic data to enable cross-species comparisons.
Michael Hawrylycz, Maryann Elizabeth Martone, Patrick R. Hof…·Brian Zingg
The paper provides a guide to the BRAIN Initiative Cell Census Network (BICCN) data ecosystem, its tools, and resources for analyzing brain cell types across species.
Zhisong He, Leander Dony, Jonas Simon Fleck…·Barbara Treutlein
This paper integrates 36 single-cell transcriptomics datasets from human neural organoids into a unified atlas to assess cell type coverage and compare organoid protocols with primary brain tissue.
Ross Lawrence, Eric Bridgeford, Patrick Myers…·Joshua T Vogelstein
The paper standardizes human brain parcellations by curating and organizing multiple atlases into a single open-source repository with standardized metadata and transformation functions.
Patrick L. Ray, Jeremy A. Miller, Dorota Jarecka…·Carol L. Thompson
This paper introduces a standards framework for integrating single-cell and spatial omics data into brain cell atlases, enabling interoperable and reusable knowledge-ready resources.
Xiaofeng Han, Shuxia Guo, Nan Ji…·Hanchuan Peng
The paper maps single cortical neurons across the human brain to profile morphological diversity and stereotypy using a new tomography approach.
Aniella Bak, Henner Koch, Karen M. J. van Loo…·Daniel Delev
This paper provides a detailed protocol for long-term human organotypic brain slice cultures, enabling extended electrophysiological studies and viral transduction.