Nature CommunicationsMicrobiologyPeer-reviewed journal article
Turicibacter strains differentially modify bile acids and host lipids
J. B. Lynch, E. L. Gonzalez, K. Choy, K. F. Faull, T. Jewell, A. Arellano, J. Liang, K. B. Yu, J. Paramo, E. Y. Hsiao
Abstract
Bacteria from the Turicibacter genus are prominent members of the mammalian gut microbiota and are associated with alterations in dietary fat and body weight, but the specific connections between these symbionts and host physiology are poorly understood. We genomically and phenotypically characterized a diverse set of mouse-and human-derived Turicibacter strains, and found they group into three clades that differ in their transformations of bile acids. We identified Turicibacter bile salt hydrolases that confer strain-specific differences in bile deconjugation. Colonization with individual Turicibacter strains led to changes in host bile acid profiles, generally aligning with those produced in vitro. Further, colonizing mice with another bacterium expressing bile-modifying genes from these strains decreased serum cholesterol and triglycerides, as well as adipose tissue mass. This work identifies genes that enable diverse Turicibacter strains to differentially modify host bile acids and lipid metabolism, and positions multiple Turicibacter strains as candidates for altering host fat biology. MAIN TEXT
- organism: mouse
- organism: human
- assay: metagenomics
- assay: proteomics
- research focus: cell type annotation
- research focus: metabolism & bioenergetics
- research focus: host-pathogen & immune response
- approach: experimental assay
- approach: genetic perturbation / CRISPR
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Ecology and engineering to modify the bile acid output of a defined microbial community
Xianfeng Zeng, Xiandong Meng, … Michael Andrew Fischbach·bioRxiv·May 25, 2026
- Loss of Bacteroides thetaiotaomicron bile acid altering enzymes impact bacterial fitness and the global metabolic transcriptome
A. S. McMillan, M. H. Foley, … C. M. Theriot·bioRxiv·Jun 27, 2023
- Lactobacillus acidophilus disrupts collaborative multispecies bile acid metabolism
Sydney Dautel, Nymul Khan, … Hans C. Bernstein·bioRxiv·Apr 11, 2018
- Genetic determinants of gut microbiota composition and bile acid profiles in mice
Julia H. Kemis, Vanessa Linke, … Federico E. Rey·PLoS GeneticsPeer-reviewed·Aug 29, 2019
- Sex-specific effects of gut microbiome on shaping bile acid metabolism
Yifei Yang, Liang Chi, … Kun Lü·bioRxiv·Jun 27, 2024
- Formation of secondary allo-bile acids by novel enzymes from gut Firmicutes
J. W. L. Lee, E. S. Cowley, … J. M. Ridlon·bioRxiv·Aug 9, 2022