Hi-Cpipe: a pipeline for high-throughput chromosome capture
Giancarlo Castellano, François Le DilyiD, Antonio Hermoso PulidoiD, Miguel BeatoiD, Guglielmo Roma
Abstract
HiC-inspector is a toolkit for the analysis and visualization of data generated by high-throughput chromatin conformation capture (HiC). The analysis module comprises steps of data formatting, genome alignment, quality control and filtering, identification of genome-wide chromatin interactions, and statistics. The interactive browser enables visual inspection of interaction data generated and analysis results.
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