Sign in
BioinformaticsThe Journal of Open Source Software
Peer-reviewed journal article

A framework for generating interactive reports for cancer genome analysis

Ai OkadaiD, Kenichi ChibaiD, Hiroko TanakaiD, Satoru MiyanoiD, Yuichi ShiraishiiD

Abstract

SummaryWe introduce paplot, the software for generating dynamic reports that are frequently necessary in the post analytical phases of cancer genome studies. The \"interactive\" nature of the paplot-generated reports enables users to extract much richer information than that obtained from static graphs via most conventional visualization tools.\n\nAvailability and implementationThe python implementation for paplot (MIT license) is available at https://github.com/Genomon-Project/paplot. The documentation is at http://paplot-doc.readthedocs.io/en/latest/.\n\nContactyshira@hgc.jp

PDFDOICode

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISCollado-Tor '15Streit '19Gel '17Zhang '18Nakken '17Lavikka '24
65% semantic matchBioinformatics