GenomicsMolecular Biology and EvolutionPeer-reviewed
Bayesian inference of infectious disease transmission from whole genome sequence data
Xavier Didelot, Jennifer Gardy, Caroline Colijn
This paper develops a Bayesian method to reconstruct disease outbreaks from genomic data, finding that even with high substitution rates, uncertainty remains in transmission inference.
DOI 10.1093/molbev/msu121