Topic · Radiology, Nuclear Medicine and Imaging · Medicine
Advanced Neuroimaging Techniques and Applications
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
932 papers
- NeuroscienceBrain CommunicationsPeer-reviewed
- NeuroscienceNeuroImage ClinicalPeer-reviewed
The Role of the Temporal Pole in Temporal Lobe Epilepsy: A Diffusion Kurtosis Imaging Study
Loxlan W. Kasa, Terry M. Peters, Seyed M. Mirsattari…·Roy A.M. Haast
This study uses diffusion kurtosis imaging to detect microstructural changes in the temporal pole of TLE patients, showing differences between lesional and non-lesional groups and correlations with seizure duration.
- NeuroscienceIEEE Transactions on Medical ImagingPeer-reviewed
Deep Diffusion MRI Registration (DDMReg): A Deep Learning Method for Diffusion MRI Registration
Fan Zhang, William M. Wells, Lauren J. O’Donnell
DDMReg improves diffusion MRI registration by using whole-brain and tract-specific information, showing better performance across diverse datasets.
41 citations - NeuroscienceHuman Brain MappingPeer-reviewed
Prevalence of white matter pathways coming into a single diffusion MRI voxel orientation: the bottleneck issue in tractography
Kurt G. Schilling, Chantal M. W. Tax, François Rheault…·Laurent Petit
This study quantifies the prevalence of bottleneck regions in white matter where multiple fiber populations share the same orientation, showing over 50-70% of fixels are affected, leading to potential errors in tractography.
- NeuroscienceJournal of the Neurological SciencesPeer-reviewed
Mapping the human corticoreticular pathway with multimodal delineation of the gigantocellular reticular nucleus and high-resolution diffusion tractography
Pierce Boyne, Mark W. DiFrancesco, Oluwole O. Awosika…·Jennifer J. Vannest
This paper maps the human corticoreticular pathway (CRP) using diffusion tractography and identifies its cortical origins, trajectory, and bilateral projections to the brainstem.
- NeuroscienceNeuroImagePeer-reviewed
Incorporating outlier information into diffusion MR tractogram filtering for robust structural brain connectivity and microstructural analyses
Viljami Sairanen, Mario Ocampo‐Pineda, Cristina Granziera…·Alessandro Daducci
This paper introduces a robust tractogram filtering method that accounts for motion artefacts in diffusion MRI, validated with simulations and infant data, showing improved structural connectivity and microstructural analyses.
- NeurosciencebioRxivPreprint
Graded variation in cortical T1w/T2w myelination during adolescence
Graham L. Baum, John Coleman Flournoy, Matthew F. Glasser…·Leah H. Somerville
The paper uses high-resolution myelin mapping to show graded variation in cortical myelination rates along the sensorimotor-association axis during adolescence.
- NeuroscienceDevelopmental Cognitive NeurosciencePeer-reviewed
Microstructural development from 9-14 years: evidence from the ABCD Study
Clare E. Palmer, Diliana Pecheva, John Rehner Iversen…·Anders Martin Dale
The paper uses restriction spectrum imaging to analyze age-related microstructural changes in brain diffusion across 9-14 year olds from the ABCD Study, finding increased restricted diffusion in subcortical regions with age.
- NeurosciencebioRxivPreprint
Mutation-related apparent myelin, not axon density, drives white matter differences in premanifest Huntington's disease: Evidence from in vivo ultra-strong gradient MRI
Chiara Casella, Maxime Chamberland, Pedro A. Luque Laguna…·Claudia Metzler‐Baddeley
This study uses ultra-strong gradient MRI to show that myelin changes, not axon density, are linked to premanifest Huntington's disease, with mutation size correlating with myelin levels.
- NeuroscienceNeuroImagePeer-reviewed
Not all voxels are created equal: reducing estimation bias in regional NODDI metrics using tissue-weighted means
Christopher S Parker, Thomas D. Veale, Martina Bocchetta…·Alzheimer’s Disease Neuroimaging Initiative
This paper introduces a tissue-weighted mean method to reduce bias in NODDI metrics by accounting for CSF partial volume, showing it improves accuracy in ROI analysis for neurodegenerative disease studies.
- NeuroscienceNeuroImagePeer-reviewed
Microstructural variation in the human striatum using non-negative matrix factorization
C Malenka Robert, Raihaan Patel, Nadia Blostein…·M. Mallar Chakravarty
This study uses non-negative matrix factorization to identify 5 spatially distinct striatal components in the human striatum, showing increased stability with multimodal data and associations with age and sex.
- NeuroscienceNeuroImagePeer-reviewed
High-resolution mapping and digital atlas of subcortical regions in the macaque monkey based on matched MAP-MRI and histology
Kadharbatcha S. Saleem, Alexandru Avram, Daniel Glen…·Peter J. Basser
The paper maps subcortical regions in macaque brains using MAP-MRI and histology, creating a digital atlas for neuroanatomical studies.
68 citationstop 4% - NeurosciencebioRxivPreprint
mrHARDIflow : A pipeline tailored for the preprocessing and analysis of Multi-Resolution High Angular diffusion MRI and its application to a variability study of the PRIME-DE database
Alex Valcourt Caron, Amir Shmuel, Ziqi Hao, Maxime Descoteaux
The paper introduces mrHARDIflow, a pipeline for preprocessing and analyzing multi-resolution diffusion MRI data, and applies it to study variability in the PRIME-DE database.
DOI 10.1101/2021.11.22.469616 - NeuroscienceAperture NeuroPeer-reviewed
Evaluating the reliability of human brain white matter tractometry
John Kruper, Jason D. Yeatman, Adam Richie-Halford…·Ariel Rokem
This study evaluates the reliability of dMRI-based tractometry by assessing reproducibility, test-retest reliability, and robustness using software and datasets from the Human Connectome Project and clinical-grade measurements.
- NeuroscienceNeuroImagePeer-reviewed
Structural connectivity-based segmentation of the human entorhinal cortex
Ingrid Framås Syversen, Menno P. Witter, Asgeir Kobro‐Flatmoen…·Christian F. Doeller
This study segments the human entorhinal cortex using structural connectivity, identifying MEC and LEC homologues based on differential connections to specific brain regions.
- NeuroscienceNeuroImagePeer-reviewed
Using diffusion MRI data acquired with ultra-high gradients to improve tractography in routine-quality data
Chiara Maffei, Cliff Lee, M. Planich…·Anastasia Yendiki
This study improves automated white-matter tractography in lower-quality diffusion MRI data by training on high-quality Connectom data and manually annotated pathways.
- NeuroscienceNeuroImagePeer-reviewed
Does powder averaging remove dispersion bias in diffusion MRI diameter estimates within real 3D axonal architectures?
Mariam Andersson, Marco Pizzolato, Hans Martin Kjer…·Tim B. Dyrby
The paper evaluates powder averaging's effectiveness in diffusion MRI for axon diameter estimation in complex brain architectures, finding it accurate across parameters but sensitive to microdispersion at low b-values.
28 citations - NeurosciencePLoS ONEPeer-reviewed
Test-retest reproducibility of in vivo oscillating gradient and microscopic anisotropy diffusion MRI in mice at 9.4 Tesla
Naila Rahman, Kathy Xu, Mohammad Omer…·Corey Allan Baron
This study evaluates the test-retest reproducibility of OGSE and microA dMRI metrics in mice brains, finding high reproducibility for microA and Lambda but not OGSE.
6 citations - NeuroscienceFrontiers in NeurologyPeer-reviewed
Fixel-Based Analysis and Free Water Corrected DTI Evaluation of HIV Associated Neurocognitive Disorders
Alan J. Finkelstein, Abrar Faiyaz, Miriam T. Weber…·Giovanni Schifitto
This study compares Fixel-based analysis and free water corrected DTI metrics in HIV+ and HIV- individuals to assess white matter damage and its association with cognitive impairment.
- NeurosciencebioRxivPreprint
White matter microstructural integrity across the adult lifespan: Combined perspective of diffusion tensor and kurtosis imaging
Hiba T. Taha, Jordan A. Chad, J. Jean Chen
This study compares diffusion tensor imaging (DTI) and diffusion kurtosis imaging (DKI) in UK Biobank data to assess how non-Gaussian diffusion metrics improve understanding of white matter aging.
DOI 10.1101/2021.10.27.466088 - NeuroscienceNeuroImagePeer-reviewed
Accuracy and precision in super-resolution MRI: Enabling spherical tensor diffusion encoding at ultra-high b-values and high resolution
Geraline Vis, Markus Nilsson, Carl‐Fredrik Westin, Filip Szczepankiewicz
This paper introduces a super-resolution reconstruction framework for diffusion MRI, showing it improves signal accuracy and precision in low-SNR conditions, especially with high-resolution and spherical b-tensor encoding.
29 citations - NeurosciencebioRxivPreprint
PyDesigner: A Pythonic Implementation of the DESIGNER Pipeline for Diffusion Tensor and Diffusional Kurtosis Imaging
Siddhartha Dhiman, Joshua Teves, Kathryn E. Thorn…·Jens H. Jensen
PyDesigner is a Python package that preprocesses diffusion MRI data and estimates tensors, improving accuracy and robustness of diffusion and kurtosis metrics.
15 citations - NeuroscienceCortexPeer-reviewed
Reassessing associations between white matter and behaviour with multimodal microstructural imaging
Alberto Lazari, Piergiorgio Salvan, Michiel Cottaar…·Heidi Johansen‐Berg
This paper reassesses WM-behaviour relationships using multimodal microstructural imaging in 50 healthy individuals, finding partial support for FA-behaviour links and suggesting multimodal approaches may better capture WM-behaviour associations.
- NeurosciencebioRxivPreprint
Multimodal Magnetic Resonance Histology and Light Sheet Imaging for Quantitative Neurogenetics of the Mouse
G. Allan Johnson, Gary Price Cofer, James Cook…·Robert W. Williams
The paper develops a combined MRI and light sheet imaging approach to generate high-resolution brain phenotypes for neurogenetic studies in mice.
- NeuroscienceCerebral CortexPeer-reviewed
Scaling principles of white matter brain connectivity
Dirk Jan Ardesch, Lianne H. Scholtens, Siemon C. de Lange…·Martijn P. van den Heuvel
The paper investigates how white matter connectivity scales with brain size across primate species, finding a bottleneck in connectivity in larger brains.
51 citationstop 4% - NeuroscienceMedical Image AnalysisPeer-reviewed
dStripe: slice artefact correction in diffusion MRI via constrained neural network
Maximilian Pietsch, Daan Christiaens, Joseph V. Hajnal, Jacques‐Donald Tournier
dStripe corrects slice artefacts in diffusion MRI using a constrained neural network to reduce interslice inconsistencies without biasing data.
15 citations - NeuroscienceNeuroImagePeer-reviewed
High-fidelity approximation of grid- and shell-based sampling schemes from undersampled DSI using compressed sensing: Post mortem validation
Robert J. Jones, Chiara Maffei, Jean C. Augustinack…·Anastasia Yendiki
This study validates compressed sensing for DSI reconstruction, showing high fidelity at R=3 with reduced acquisition time, but degradation at higher acceleration factors.
18 citations - NeuroscienceNeuroImagePeer-reviewed
Neural Networks for parameter estimation in microstructural MRI: a study with a high-dimensional diffusion-relaxation model of white matter microstructure
João P. de Almeida Martins, Markus Nilsson, Björn Lampinen…·Filip Szczepankiewicz
This study uses deep neural networks to accelerate parameter estimation in a high-dimensional diffusion-relaxation MRI model but finds that machine learning cannot replace careful acquisition protocol design.
50 citationstop 4% - NeuroscienceNeuroImagePeer-reviewed
Mapping the Human Visual Thalamus and its Cytoarchitectonic Subdivisions Using Quantitative MRI
Christa Müller-Axt, Cornelius Eichner, Henriette Rusch…·Katharina von Kriegstein
This paper uses quantitative MRI to non-invasively map the human lateral geniculate nucleus and its subdivisions, showing that T1 contrast reflects cyto- and myeloarchitectonic differences.
- NeuroscienceMagnetic Resonance in MedicinePeer-reviewed
Training Data Distribution Significantly Impacts the Estimation of Tissue Microstructure with Machine Learning
Noemi G. Gyori, Marco Palombo, Chris A. Clark…·Daniel C. Alexander
This paper shows that training data distribution affects the accuracy and precision of microstructural parameter estimates using supervised machine learning in quantitative MRI.
77 citationstop 2%