Author

A. Boags

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:mechanistic / dynamical model· 3 Research Focus:drug response / drug discovery· 2 Organism:E. coli· 2 Research Focus:cell signaling & trafficking· 1 Approach:experimental assay· 1 Assay:protein structure· 1 Assay:structural biology· 1 Organism:virus· 1

Frequent Co-Authors

S. Khalid· 3 shared C. Pedebos· 2 shared F. Samsudin· 2 shared A. T. Shivgan· 1 shared G. S. Anand· 1 shared I. Smith· 1 shared J. K. Marzinek· 1 shared J. Warwicker· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersBiophysics

S. Khalid

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Author profile →

3 papers

Recent·Most cited

Uncovering cryptic pockets in the SARS-CoV-2 spike glycoprotein

L. Zuzic, F. Samsudin, A. T. Shivgan, P. V. Raghuvamsi, J. K. Marzinek, A. Boags, C. Pedebos, N. K. Tulsian, J. Warwicker, P. MacAry, M. Crispin, S. Khalid, G. S. Anand, P. J. Bond

This study identifies a novel cryptic pocket on the SARS-CoV-2 spike protein using molecular dynamics simulations and validates its druggable potential through experimental methods.

bioRxiv · May 5, 2021Biophysics

The Hitchhiker's Guide to the Periplasm: Unexpected Molecular Interactions of Antibiotics Revealed by Considering Crowding Effects in E. coli

C. Pedebos, I. Smith, A. Boags, S. Khalid

This study uses molecular dynamics simulations to show that the antibiotic polymyxin B1 forms transient and long-lived interactions with periplasmic proteins and lipoproteins, suggesting it hitchhikes through the periplasm rather than diffusing freely.

bioRxiv · Jun 3, 2020 · PreprintBiochemistry

Binding From both sides: TolR and full-length OmpA bind and maintain the local structure of the E. coli cell wall

A. Boags, F. Samsudin, S. Khalid

This study uses molecular modeling to show TolR and OmpA bind the E. coli cell wall from opposite sides, maintaining its structure without Brauns lipoprotein.

bioRxiv · Nov 19, 2018Biophysics