Author

A. Savinov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Organism:E. coli· 1

Frequent Co-Authors

A. E. Keating· 1 shared A. Fernandez· 1 shared B. N. Newby· 1 shared C. E. Mathews· 1 shared D. Egli· 1 shared D. J. Perry· 1 shared G.-W. Li· 1 shared H. Russ· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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1 shared paperBiophysics

A. E. Keating

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

High-throughput discovery of inhibitory protein fragments with AlphaFold

A. Savinov, S. Swanson, A. E. Keating, G.-W. Li

This paper introduces FragFold, a computational method using AlphaFold to predict inhibitory protein fragments, showing high accuracy in predicting binding and inhibitory activity.

bioRxiv · Dec 19, 2023Biophysics

Mapping functional regions of essential bacterial proteins with dominant-negative protein fragments

A. Savinov, A. Fernandez, S. Fields

This paper maps inhibitory activity of protein fragments against ten essential bacterial proteins, revealing principles of fragment-based inhibition and their relationship to protein interactions.

bioRxiv · Jan 4, 2022Microbiology

Use of Induced Pluripotent Stem Cells to Build Isogenic Systems and Investigate Type 1 Diabetes

L. H. Armitage, S. E. Stimpson, K. E. Santostefano, L. Sui, S. O. Ogundare, B. N. Newby, R. Castro-Gutierrez, M. K. Huber, J. P. Taylor, P. Sharma, I. Radichev, D. J. Perry, N. Fredette, A. Savinov, N. Terada, , C. E. Mathews

This paper demonstrates the use of induced pluripotent stem cells to create an isogenic system for studying genetic influences on cell-cell interactions in type 1 diabetes.

bioRxiv · May 3, 2021Immunology