Author

Aarushi Sehgal

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:variant calling· 2 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Helyaneh Ziaei JamiD· 2 shared Melissa GymrekiD· 2 shared Andrew SheniD· 1 shared Jonghun ParkiD· 1 shared Justin M. ZookiD· 1 shared Sara JavadzadehiD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

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6 top collaborators · 12 mutual co-author links

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2 shared papersBioinformatics

Helyaneh Ziaei JamORCID

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2 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedJul 30, 2024

Genome wide detection of somatic mosaicism at short tandem repeats

Aarushi Sehgal, Helyaneh Ziaei Jam, Andrew Shen, Melissa Gymrek

The paper introduces prancSTR, a method to detect somatic mosaicism at short tandem repeats (STRs) using whole genome sequencing data without requiring a matched control sample.

11 citations

humanwhole-genome sequencing

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BioinformaticsbioRxivPreprintJan 20, 2024

Genome-wide profiling of genetic variation at tandem repeat from long reads

Helyaneh Ziaei Jam, Justin M. Zook, Sara Javadzadeh…·Melissa Gymrek

This paper introduces LongTR, a tool for accurately genotyping tandem repeats from long reads, and provides its code repository.

7 citations

humanlong-read sequencing

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