Author

Alexander Perez

Illinois Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biophysics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:mechanistic / dynamical model· 1 Research Focus:protein folding & dynamics· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

André KahlesiD· 1 shared Gunnar RätschiD· 1 shared Jeff WereszczynskiiD· 1 shared Kjong-Van LehmanniD· 1 shared Natalie Davidson· 1 shared Ryan Matthew HebertiD· 1 shared

Activity by Year

2014-2025 · peak 1/yr

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6 top collaborators · 7 mutual co-author links

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1 shared paperCancer Biology

André KahlesORCID

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2 papers

Recent·Most cited

BiophysicsACS Physical Chemistry AuPeer-reviewedOct 21, 2025

Molecular Mechanisms of Gain-of-Function Mutations in {lambda} Cro Revealed by Molecular Dynamics Simulations

Ryan Matthew Hebert, Alexander Perez, Jeff Wereszczynski

The paper uses molecular dynamics simulations to study how mutations in the bacteriophage λ Cro repressor alter its DNA-binding properties and regulatory function.

DOI 10.1021/acsphyschemau.5c00082

protein structuremechanistic / dynamical model

𝕏 PostBluesky

Cancer BiologybioRxivPreprintDec 13, 2014

Integrative Analysis of Transcriptome Variation in Uterine Carcinosarcoma and Comparison to Sarcoma and Endometrial Carcinoma

Natalie Davidson, Kjong-Van Lehmann, André Kahles…·Gunnar Rätsch

The paper compares transcriptome variations between Uterine Carcinosarcoma, Sarcomas, and Endometrial Carcinoma to identify tumor-specific splicing and expression patterns and genetic determinants of expression differences.

DOI 10.1101/012708

humanbulk RNA-seq

𝕏 PostBluesky