Author

Andrey Vasilyev

American Heritage High School, Plantation, FL 33325, USA;

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1

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Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Research Focus:protein structure prediction· 1 Assay:structural biology· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Azam ShiraliiD· 1 shared Giri NarasimhaniD· 1 shared Ishaan Garg· 1 shared Kalai MatheeiD· 1 shared Parshatd Govindasamy· 1 shared Pavitra Soni· 1 shared Prem Chapagain· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioengineering

Azam ShiraliORCID

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1 paper

Recent·Most cited

BioengineeringbioRxivPreprintNov 12, 2026

RNAtomy: A Structure-Aware RNA Foundation Model for Transferable Structural and Functional Representations

Azam Shirali, Ishaan Garg, Andrey Vasilyev…·Giri Narasimhan

RNAtomy is a structure-aware RNA foundation model that learns structural and functional representations from geometric and conformational features, achieving strong performance on diverse tasks.

DOI 10.64898/2026.11.10.765792

long-read sequencingstructural biology

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