Author

Angel Mendieta

Universidad de Costa Rica

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Biology Disciplines

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Genomics· 1

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Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Research Focus:spatial domain detection· 1

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Esteban Dodero‐RojasiD· 1 shared José N. OnuchiciD· 1 shared Nicholas Mayala· 1 shared Vinícius G. ContessotoiD· 1 shared Yao Fehlis· 1 shared

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Recent·Most cited

GenomicsPLoS Computational BiologyPeer-reviewedDec 3, 2025

Epigenetics is all you need: A Transformer to decode chromatin structural compartments from the epigenome

Esteban Dodero‐Rojas, Angel Mendieta, Yao Fehlis…·José N. Onuchic

This paper introduces TECSAS, a Transformer model that predicts chromatin subcompartment annotations from epigenomic data, revealing the impact of long-range epigenomic context on chromatin organization.

3 citations

ChIP-seqDNA methylation

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