Author

Arda Akdemir

Institute of Medical Science, The University of Tokyo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 1 Assay:long-read sequencing· 1 Research Focus:variant calling· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Georg TremmeliD· 1 shared Rui YamaguchiiD· 1 shared Satoru MiyanoiD· 1 shared Seiya ImotoiD· 1 shared Tetsuo ShibuyaiD· 1 shared Yaozhong ZhangiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Georg TremmelORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintJul 8, 2019

Nanopore base-calling from a perspective of instance segmentation

Yaozhong Zhang, Arda Akdemir, Georg Tremmel…·Rui Yamaguchi

This paper introduces a base-calling method for nanopore sequencing by framing it as a one-dimensional segmentation task, achieving competitive accuracy compared to existing methods.

6 citations

long-read sequencingdeep learning

𝕏 PostBluesky