Author

B. R. Dandekar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Biophysics· 1

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Research Focus:protein folding & dynamics· 2 Approach:comparative / phylogenetic analysis· 1 Approach:statistical model· 1 Assay:structural biology· 1

Frequent Co-Authors

J. Mondal· 2 shared N. Ahalawat· 1 shared

Activity by Year

2019-2020 · peak 1/yr

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2 top collaborators · 1 mutual co-author link

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2 shared papersBiochemistry

J. Mondal

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2 papers

Recent·Most cited

BiochemistrybioRxivJun 8, 2020

Reconciling Conformational Heterogeneity and Substrate Recognition in Cytochrome P450

B. R. Dandekar, N. Ahalawat, J. Mondal

This paper quantifies conformational heterogeneity in substrate-free cytochrome P450cam using simulations and identifies a dynamic equilibrium between closed and open conformations, suggesting an induced-fit mechanism for substrate recognition.

DOI 10.1016/j.bpj.2021.02.040

structural biologystatistical model

𝕏 PostBluesky

BiophysicsbioRxivDec 8, 2019

Capturing Protein-Ligand Recognition Pathways in Coarse-grained Simulation

B. R. Dandekar, J. Mondal

This paper demonstrates that coarse-grained simulations can efficiently capture protein-ligand binding pathways, offering a computationally cheaper alternative to all-atom MD simulations.

DOI 10.1021/acs.jpclett.0c01683

comparative / phylogenetic analysisprotein folding & dynamics

𝕏 PostBluesky