Author

C. M. Phillips

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cell Biology· 2 Bioengineering· 1 Cancer Biology· 1 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 4 Research Focus:chromatin & epigenetic regulation· 3 Approach:experimental assay· 3 Organism:human· 3 Organism:C. elegans· 2 Research Focus:cell signaling & trafficking· 2 Assay:imaging· 2 Approach:statistical model· 2

Frequent Co-Authors

A. Domingues· 1 shared A.-S. Seistrup· 1 shared C. J. Uebel· 1 shared D. A. Hormuth· 1 shared D. A. Nguyen· 1 shared D. Faghihi· 1 shared D. R. King· 1 shared E. A. B. F. Lima· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 7 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperCell Biology

A. Domingues

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

The Helicobacter pylori Methylome is Acid-Responsive due to Regulation by the Two-Component System ArsRS and the Type I DNA Methyltransferase HsdM1 (HP0463)

E. H. Zimmerman, E. L. Ramsey, K. E. Hunter, S. M. Villadelgado, C. M. Phillips, R. T. Shipman, M. H. Forsyth

This study shows that Helicobacter pylori's methylome responds to acidity via the ArsRS two-component system and HsdM1, with differential methylation patterns affecting gene expression during acid stress.

bioRxiv · Sep 22, 2023 · PreprintMicrobiology

Caenorhabditis elegans germ granules are present in distinct configurations that differentially associate with RNAi-targeted RNAs

C. J. Uebel, S. Rajeev, C. M. Phillips

The paper investigates the spatial organization of C. elegans germ granules and their association with RNAi-targeted RNAs, revealing distinct configurations and functional differences.

bioRxiv · May 25, 2023Cell Biology

Acute adenoviral infection elicits an arrhythmogenic substrate prior to myocarditis

R. L. Padget, M. J. Zeitz, G. A. Blair, X. Wu, M. D. North, G. S. Hoeker, K. E. Stanley, C. M. Phillips, D. R. King, R. G. Gourdie, M. T. Tanenbaum, G. S. Hoeker, S. A. Swanger, S. Poelzing, J. W. Smyth

This study shows adenoviral infection causes arrhythmogenic changes in the heart before significant immune response, through gap junction and ion channel dysfunction.

bioRxiv · Nov 29, 2022Pathology

PhysiCOOL: A generalized framework for model Calibration and Optimization Of modeLing projects

I. G. Goncalves, D. A. Hormuth, S. Prabhakaran, C. M. Phillips, J. M. Garcia-Aznar

PhysiCOOL provides an open-source Python library for calibrating and optimizing PhysiCell models without requiring high-performance computing.

bioRxiv · Nov 17, 2022Bioengineering

Bayesian calibration of a stochastic, multiscale agent-based model for predicting in vitro tumor growth

E. A. B. F. Lima, D. Faghihi, R. Philley, J. Yang, J. Virostko, C. M. Phillips, T. Yankeelov

The paper develops a Bayesian-calibrated multiscale agent-based model to predict tumor growth using microscopy data, achieving reliable predictions with low error and standard deviation.

bioRxiv · Mar 3, 2021Cancer Biology

A membrane-associated condensate drives paternal epigenetic inheritance in C. elegans

J. Schreier, S. Dietz, A. Domingues, A.-S. Seistrup, D. A. Nguyen, E. Gleason, H. Ling, S. l'Hernault, C. M. Phillips, F. Butter, R. Ketting

This study identifies a phase separation mechanism involving PEI-1 that enables paternal epigenetic inheritance in C. elegans by securing WAGO-3 in sperm.

bioRxiv · Dec 10, 2020Cell Biology