Evolutionary BiologybioRxiv
Identification of hidden population structure in time-scaled phylogenies
E. Volz, C. Wiuf, Y. Grad…·X. Didelot
This paper introduces a statistical test to detect hidden population structure in time-scaled phylogenies and applies it to HIV-1 and Neisseria gonorrhoeae data to identify outbreaks and antimicrobial resistance patterns.
DOI 10.1093/sysbio/syaa009