Author

Chenyu Shi

Ocean University of China

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:proteomics· 1

Frequent Co-Authors

Qi LiiD· 3 shared Daniel J. MacqueeniD· 2 shared Shikai LiuiD· 2 shared Ying TaniD· 2 shared Chenguang Chen· 1 shared Fuqiang ZhangiD· 1 shared Liting Ren· 1 shared Shikai LiuiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersGenomics

Qi LiORCID

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3 papers

Recent·Most cited

Evolutionary BiologyCommunications BiologyPeer-reviewedJan 20, 2026

Glycophagy is an ancient bilaterian pathway supporting metabolic adaptation through STBD1 structural evolution

Liting Ren, Yitian Bai, Chenyu Shi…·Shikai Liu

This study identifies STBD1 as a conserved glycophagy receptor in bilaterians, showing its structural evolution supports metabolic adaptation across species.

8 citationstop 1%

bacteria (other)proteomics

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 9, 2024

The origins and functional significance of bivalve genome diversity

Shikai Liu, Chenyu Shi, Chenguang Chen…·Qi Li

This study investigates the origins and functional significance of genomic diversity in bivalves, focusing on oysters, and identifies haplotype divergent sequences as key drivers of genetic innovation and adaptation.

DOI 10.1101/2024.09.09.611967

bacteria (other)whole-genome sequencing

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GenomicsbioRxivPreprintMay 1, 2022

Gene expression signatures underlying inbreeding depression as revealed by whole-transcriptome analysis of selectively bred strains of the Pacific Oyster (Crassostrea gigas)

Chenyu Shi, Fuqiang Zhang, Qi Li, Shikai Liu

1 citation

bulk RNA-seqstatistical model

𝕏 PostBluesky