Author
Cold Spring Harbor Laboratory
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
4 papers
Recent·Most cited
Alessandra Breschi, Manuel Muñoz-Aguirre, Valentin Wucher…·Roderic Guigó
The paper identifies five major cell types based on transcriptional programs in human tissues and shows their composition correlates with tissue morphology and disease.
Sorena Rahmanian, Rabi Murad, Alessandra Breschi…·Ali Mortazavi
The paper analyzes miRNA expression dynamics across mouse embryonic development, identifying tissue-specific clusters and their regulatory roles.
Dmitri Pervouchine, Sarah Djebali, Alessandra Breschi…·Thomas R Gingeras
The paper analyzes RNA-seq data from multiple mouse tissues to identify genes with conserved expression patterns across species and cell types, revealing evolutionary constraints in gene expression.
Alexander Dobin, Carrie Davis, Felix J. Schlesinger…·T Gingeras
Maximum mappable seed search in uncompressed suffix arrays, then seed clustering and stitching, aligns 550 million paired-end reads per hour on 12 cores with better sensitivity and precision.